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Hello everyone.
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I'm Himani Patel pursuing a bachelor's of science in biology from the University of
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Nebraska Lincoln. I'm from India.
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I am an aspiring biologist and bioinformatician.
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Focus of my research
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is climate change and
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Conservation biology.
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My project is funded and supported by Undergraduate Creative Activities and
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Research Experience. Also known as UCARE,
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I'm grateful to get this chance to, you know,
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present my research through UCARE. Um,
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Today, I'll be talking about how the increasing temperatures affect the metabolic
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rate and physiology of the invasive, freshwater
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species, Potamopyrgus antipodarum. weird name,
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right? But you can call it New Zealand mud
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snail. Let us first talk about invasive alien species and climate
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change.
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These two factors at the leading cause of species extinction and
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biodiversity loss.
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Invasive alien species are the organisms non-native to the
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ecosystem, which negatively impacts native biodiversity.
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The invasive alien species are mostly resilient and can survive a
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wide range of temperatures, salinity,
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altitude and other abiotic factors while the native species are not
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resilient. So they are led to extinction in the long run.
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So now there are
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some research evidences that suggest that with climate change,
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the invasion rate will increase. However,
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the question remains, how do the invaders,
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survive increasing temperature and what genetic
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phenotypic and physiological factors help them thrive?
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How does the metabolic plasticity play a role in their invasive
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potential?
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Answering these questions will help us figure out ways to combat
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invasive alien species and save biodiversity. By saving
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biodiversity; We will mitigate the risk of climate change.
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And that, in turn, will decrease the rate of invasion.
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To fill in this knowledge gap,
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I developed the experiment where I compare the metabolic rate of these
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snails at different temperatures.
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But before I explain
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my experiment, let me introduce my model organism, New Zealand Mud
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Snail. Um, it is very tiny four to six millimeters in length.
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Um, you can also see the size comparison with a dime.
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These nails are impressively resilient and they spread,
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or I should say they invade new ecosystem by surviving on a fishing
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gear or a boat and they travel wherever we,
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humans,
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travel. Now, why do I use
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this model to investigate the effects of climate change?
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Well, this snail
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can survive wide range of temperatures,
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and we can see that because this snail has invaded all continents in
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last 150 years.
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This gives us the opportunity to investigate and compare the metabolic response
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of this snail across different environmental conditions.
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So, this is the best model for my research.
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I used five lineages of 37A mitochondrial haplotype.
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Now what does that mean?
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That means that all lineages in that haplotype will have the same
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mitochondrial genome, but they will have a variation in their nuclear genome.
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We collected these snails from the lake in New Zealand called Mapourika.
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So what is the specific research
question I'm trying to answer?
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How does the metabolic rate of
New Zealand mud snail change with
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elevated temperature
across different lineages?
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What are the approaches I used?
first is respirometry,
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I measured the whole organisms
metabolic rate at 16 degrees Celsius and
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22 degrees Celsius. 2. Global
metabolic profiling,
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where I performed enzyme assays,
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which gave us the physiological
comparison between these lineages
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3. nuclear genome analysis.
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This is the extension of my research where
I'll be doing bioinformatics analysis
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to see if there are any genetic
basis of the metabolic plasticity.
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Now, what was the experimental
design? very straightforward.
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The five different lineages
were used in this experiment.
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The control group was kept at
16 degrees Celsius for two weeks.
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The whole organism's
metabolic rate was measured.
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The snails were sacrificed and
the whole body issue was frozen in
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liquid nitrogen.
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And it was stored at negative
80 degrees Celsius for further
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analysis. Um,
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the same process was followed for the
22 degrees Celsius experimental group.
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And after designing this experiment,
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we hypothesized that the metabolic
rate should increase with
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increasing temperature
for all lineages, right?
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It makes sense that it should increase
if we increase the temperature.
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Now you might.
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Wonder how do we measure the
whole organisms metabolic rate?
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We use respirometer
to do that. There's a small,
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small Water-filled chamber
inside of the respirometer,
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and it is attached,
to an incubator, which, uh,
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controls the temperature of that chamber.
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So we put our snail inside that
chamber for about 45 minutes. Um,
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the snail respires inside the chamber,
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and there is a drop in
the oxygen concentration,
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which is measured by the
electrode attached to the chamber.
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As you see on the screen.
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It gives you a
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beautiful graph on the computer,
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which tells us the change in
oxygen concentration with time.
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This is the snail stock room image,
and this is me working with snails,
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changing the water and feeding them
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After data collection.
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I performed ANOVA analysis and
built these beautiful graphs.
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The P-value on the graph suggests
that there is a significant
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difference between the metabolic rate
of these lineages at both temperatures,
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as you can see,
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MP 18-19 in Green has lower
metabolic rate at 16 degrees
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Celsius than MP 18-8 in purple. Now,
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if you compare the rates at
22 degrees Celcius,
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it's the other way around. MP 18-19
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lineage has increased the metabolic
rate with increasing temperature.
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Whereas the MP 18-8
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has lowered the metabolic
rate at elevated temperature.
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So what can we conclude from this graph?
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We can say that there is a significant
difference in metabolic rate of the
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lineages. And that might
be due to the change,
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the variation in the nuclear genome.
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Then I performed two factors ANOVA
analysis, which gave this graph,
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um, where you can see
that only one lineage,
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show a significant increase in
the metabolic rate with increasing
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temperature, um, MP 18-19, the green one,
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the red MP-18-9 show an increase,
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but it is not significant orange
and blue lineages have almost the
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same metabolic rate at
both temperatures. However,
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MP 18-8 in purple show a
decrease in metabolic rate with
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elevated temperature.
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So the initial hypothesis stated that
the metabolic rates would increase
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for all of the lineages with increasing
temperature. It is only true for one of the
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lineages and not the rest.
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To find out the reasons.
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We need to extend this research
and extend this experiment.
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Um, and
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that brings us to conclusions and
future directions. From the results,
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We can conclude that there is a standing
genetic variation in the natural
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snail population,
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which is affecting their metabolic
rate at different temperatures.
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And this should be due to a
variation in their nuclear genome,
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as they shared the same
mitochondrial genome.
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The extension of this research
would be to analyze the genome for
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the single nucleotide polymorphisms sites.
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It's also known as SNP sites
to get a better understanding of
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how the metabolic rate is
changing with temperature.
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With that, I will conclude my talk. And
if you would like to follow my work,
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my research, please follow me on
Twitter on this handle, Himani_D_Patel.
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And I would love to connect with
you and answer any questions you may
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have. Thank you.