Return to Video

R,S (Cahn-Ingold-Prelog) Naming System Example 2

  • 0:01 - 0:04
    Let's see if we can name this
    molecule using the-- sometimes
  • 0:04 - 0:09
    called the R-S system, or the
    Cahn-Ingold-Prelog system.
  • 0:09 - 0:12
    And the first thing to do is
    just to see if there are any
  • 0:12 - 0:14
    chiral centers in
    this molecule.
  • 0:14 - 0:15
    If there aren't, then
    we don't even have
  • 0:15 - 0:16
    to use the R-S system.
  • 0:16 - 0:18
    We can just use our standard
    nomenclature
  • 0:18 - 0:19
    rules and we'd be done.
  • 0:19 - 0:22
    So if we look here, this carbon
    is attached to three
  • 0:22 - 0:23
    hydrogens, so it's definitely
    not attached to
  • 0:23 - 0:24
    four different groups.
  • 0:24 - 0:27
    Same thing about this
    carbon right here.
  • 0:27 - 0:30
    This carbon right here is
    attached to a fluorine, but
  • 0:30 - 0:33
    then it's attached to
    two methyl groups.
  • 0:33 - 0:36
    So it's the same group, so
    this is also not a chiral
  • 0:36 - 0:38
    carbon or an asymmetric
    carbon.
  • 0:38 - 0:43
    This carbon right here is
    attached to a hydrogen and
  • 0:43 - 0:46
    three other carbons, but each
    of these three carbons look
  • 0:46 - 0:47
    like different groups.
  • 0:47 - 0:49
    This carbon is attached to two
    methyls and a fluorine.
  • 0:49 - 0:52
    This carbon is attached to two
    hydrogens and a bromine.
  • 0:52 - 0:54
    This carbon is just
    a methyl group.
  • 0:54 - 0:57
    So this right here does look
    like a chiral center.
  • 0:57 - 0:59
    It does look like a
    chiral carbon, and
  • 0:59 - 1:00
    the other ones don't.
  • 1:00 - 1:01
    This is just a methyl group.
  • 1:01 - 1:04
    It has three hydrogens, so
    definitely not attached to
  • 1:04 - 1:06
    four different groups.
  • 1:06 - 1:08
    And this is attached to two
    hydrogens, and those are
  • 1:08 - 1:10
    obviously the same group,
    so this is also
  • 1:10 - 1:11
    not a chiral center.
  • 1:11 - 1:14
    So we have one chiral
    center, so the R-S
  • 1:14 - 1:16
    naming system will apply.
  • 1:16 - 1:19
    But a good starting point will
    just be naming it using our
  • 1:19 - 1:21
    standard nomenclature rules.
  • 1:21 - 1:24
    And to do that we look for the
    longest carbon chain here.
  • 1:24 - 1:27
    Let's see, if we start over
    here, and I don't know what
  • 1:27 - 1:30
    direction I'm going to name it
    from yet, but I just want to
  • 1:30 - 1:32
    identify the longest chain.
  • 1:32 - 1:34
    If we went from here, we
    have one, two, three.
  • 1:34 - 1:37
    We can either go to four or to
    four there, so we definitely
  • 1:37 - 1:41
    have four carbons, Four
    carbon, longest chain.
  • 1:45 - 1:48
    So that tells us that we will
    be using the prefix but-, or
  • 1:48 - 1:51
    it will be a butane, because
    they're all single bonds here,
  • 1:51 - 1:53
    so it is a butane.
  • 1:53 - 1:55
    But to decide whether we branch
    off, it doesn't matter
  • 1:55 - 1:59
    whether we use this
    CH3 or this CH3,
  • 1:59 - 2:00
    they're the same group.
  • 2:00 - 2:04
    But to decide whether we use
    this part of the longest chain
  • 2:04 - 2:09
    or we use that, we think about
    the rule that the core chain
  • 2:09 - 2:13
    to use should have as many
    simple groups attached to it
  • 2:13 - 2:18
    as possible, as opposed to
    as few complex groups.
  • 2:18 - 2:22
    So if we used this carbon as
    part of our longest chain,
  • 2:22 - 2:24
    then this will be a group that's
    attached to it, which
  • 2:24 - 2:29
    would be a bromomethyl group,
    which is not as simple as
  • 2:29 - 2:30
    maybe it could be.
  • 2:30 - 2:32
    But if we use this carbon in our
    longest chain, we'll have
  • 2:32 - 2:33
    two groups.
  • 2:33 - 2:35
    We'll have a bromo attached,
    and we'll also
  • 2:35 - 2:36
    have a methyl group.
  • 2:36 - 2:37
    And that's what we want.
  • 2:37 - 2:41
    We want more simple groups
    attached to the longest chain.
  • 2:41 - 2:43
    So what we're going to do is
    we're going to use this
  • 2:43 - 2:47
    carbon, this carbon, this
    carbon, and that carbon as our
  • 2:47 - 2:48
    longest chain.
  • 2:48 - 2:52
    And we want to start from the
    end that is closest to
  • 2:52 - 2:54
    something being attached
    to it, and that
  • 2:54 - 2:55
    bromine is right there.
  • 2:55 - 2:57
    So there's going to be our
    number one carbon, our number
  • 2:57 - 3:00
    two carbon, our number
    three carbon, and
  • 3:00 - 3:01
    our number four carbon.
  • 3:01 - 3:03
    And then we can label the
    different groups and then
  • 3:03 - 3:08
    figure out what order they
    should be listed in.
  • 3:08 - 3:14
    So this is a 1-bromo and
    then this will be a
  • 3:14 - 3:15
    2-methyl right here.
  • 3:19 - 3:21
    And then just a hydrogen.
  • 3:21 - 3:25
    Then three we have a fluoro, so
    on a carbon three, we have
  • 3:25 - 3:30
    a fluoro, and then on carbon
    three, we also have a methyl
  • 3:30 - 3:32
    group right here, so we
    also have a 3-methyl.
  • 3:35 - 3:38
    So when we name it, we put
    in alphabetical order.
  • 3:38 - 3:41
    Bromo comes first, so this thing
    right here is 1-bromo.
  • 3:45 - 3:48
    Then alphabetically, fluoro
    comes next, 1-bromo-3-fluoro.
  • 3:53 - 3:56
    We have two methyls, so it's
    going to be 2 comma
  • 3:56 - 3:57
    3-dimethyl.
  • 4:00 - 4:03
    And remember, the D doesn't
    count in alphabetical order.
  • 4:03 - 4:11
    Dimethylbutane, because
    we have the longest
  • 4:11 - 4:13
    chain is four carbons.
  • 4:13 - 4:15
    Dimethylbutane.
  • 4:15 - 4:17
    So that's just the standard
    nomenclature rules.
  • 4:17 - 4:19
    We still haven't used
    the R-S system.
  • 4:19 - 4:20
    Now we can do that.
  • 4:20 - 4:22
    Now to think about that, we
    already said that this is our
  • 4:22 - 4:26
    chiral center, so we just have
    to essentially rank the groups
  • 4:26 - 4:29
    attached to it in order of
    atomic number and then use the
  • 4:29 - 4:33
    Cahn-Ingold-Prelog rules,
    and we'll do all
  • 4:33 - 4:34
    that in this example.
  • 4:34 - 4:37
    So let's look at the different
    groups attached to it.
  • 4:37 - 4:39
    So when you look at it,
    this guy has three
  • 4:39 - 4:40
    carbons and a hydrogen.
  • 4:40 - 4:43
    Carbon is definitely higher
    in atomic number on
  • 4:43 - 4:44
    the Periodic Table.
  • 4:44 - 4:46
    It has an atomic number 6.
  • 4:46 - 4:47
    Hydrogen is 1.
  • 4:47 - 4:49
    You probably know
    that already.
  • 4:49 - 4:51
    So hydrogen is definitely
    going to be number four.
  • 4:51 - 4:55
    So let me put number four there
    next to the hydrogen.
  • 4:55 - 4:57
    And let me find a nice color.
  • 4:57 - 4:58
    I'll do it in white.
  • 4:58 - 5:01
    So hydrogen is definitely
    the number four group.
  • 5:01 - 5:03
    We have to differentiate between
    this carbon group,
  • 5:03 - 5:05
    that carbon group, and
    that carbon group.
  • 5:05 - 5:08
    And the way you do it, if
    there's a tie on the three
  • 5:08 - 5:11
    carbons, you then look at what
    is attached to those carbons,
  • 5:11 - 5:13
    and you compare the highest
    thing attached to each of
  • 5:13 - 5:15
    those carbons to the highest
    things attached to the other
  • 5:15 - 5:19
    carbons, and then you
    do the same ranking.
  • 5:19 - 5:22
    And if that's a tie, then you
    keep going on and on and on.
  • 5:22 - 5:25
    So on this carbon right here,
    we have a bromine.
  • 5:25 - 5:30
    Bromine has an atomic
    number of 35, which
  • 5:30 - 5:35
    is higher than carbon.
  • 5:35 - 5:38
    So this guy has a bromine
    attached to it.
  • 5:38 - 5:41
    This guy only has hydrogen
    attached to it.
  • 5:41 - 5:43
    This guy has a fluorine
    attached to it.
  • 5:43 - 5:44
    That's the highest thing.
  • 5:44 - 5:48
    So this is going to be the third
    lowest, or I should say
  • 5:48 - 5:51
    the second to lowest, because it
    only has hydrogens attached
  • 5:51 - 5:52
    to it, so that is
    number three.
  • 5:52 - 5:54
    The one has the bromine attached
    to it is going to be
  • 5:54 - 5:59
    number one, and the one that has
    the fluorine attached to
  • 5:59 - 6:00
    it is number two.
  • 6:02 - 6:05
    And just a reminder, we were
    tied with the carbon, so we
  • 6:05 - 6:07
    have to look at the next highest
    constituent, and even
  • 6:07 - 6:11
    if this had three fluorines
    attached to it, the bromine
  • 6:11 - 6:12
    would still trump it.
  • 6:12 - 6:16
    You compare the highest to the
    highest. So now that we've
  • 6:16 - 6:18
    done that, let me redraw this
    molecule so it's a little bit
  • 6:18 - 6:20
    easier to visualize.
  • 6:20 - 6:24
    So I'll draw our chiral
    carbon in the middle.
  • 6:27 - 6:29
    And I'm just doing this for
    visualization purposes.
  • 6:29 - 6:31
    And right here we have
    our number one group.
  • 6:31 - 6:34
    I'll literally just call that
    our number one group.
  • 6:34 - 6:37
    So right there that is
    our number one group.
  • 6:37 - 6:40
    It's in the plane
    of the screen.
  • 6:40 - 6:43
    So I'll just call that
    our number one group.
  • 6:45 - 6:50
    Over here, also in the plane
    of the screen, I have our
  • 6:50 - 6:51
    number two group.
  • 6:54 - 6:55
    So let me do it like that.
  • 6:55 - 7:02
    So then you have your number
    two group, just like that.
  • 7:02 - 7:04
    And then you have your number
    three group behind the
  • 7:04 - 7:06
    molecule right now the
    way it's drawn.
  • 7:06 - 7:10
    I'll do that in magenta.
  • 7:10 - 7:12
    So then you have your
    number three group.
  • 7:12 - 7:15
    It's behind the molecule, so
    I'll draw it like this.
  • 7:15 - 7:18
    This is our number
    three group.
  • 7:20 - 7:22
    And then we have our number
    four group, which is the
  • 7:22 - 7:25
    hydrogen pointing
    out right now.
  • 7:25 - 7:27
    And I'll just do that
    in a yellow.
  • 7:27 - 7:29
    We have our number four
    group pointing out
  • 7:29 - 7:31
    in front right now.
  • 7:31 - 7:38
    So that is number four,
    just like that.
  • 7:38 - 7:41
    Actually, let me draw it a
    little bit clearer, so it
  • 7:41 - 7:43
    looks a little bit more like the
    tripod structure that it's
  • 7:43 - 7:44
    supposed to be.
  • 7:44 - 7:46
    So let me redraw the
    number three group.
  • 7:46 - 7:51
    The number three group should
    look like-- so this is our
  • 7:51 - 7:52
    number three group.
  • 7:52 - 7:55
    Let me draw it a little
    bit more like this.
  • 7:55 - 7:57
    The number three group
    is behind us.
  • 8:00 - 8:02
    And then finally, you have
    your number four group in
  • 8:02 - 8:06
    yellow, which is just a
    hydrogen that's coming
  • 8:06 - 8:08
    straight out.
  • 8:08 - 8:11
    So that is coming straight out
    of-- well, not straight out,
  • 8:11 - 8:12
    but at an angle out
    of the page.
  • 8:12 - 8:14
    So that's our number four group,
    I'll just label it
  • 8:14 - 8:15
    number four.
  • 8:15 - 8:16
    It really is just a hydrogen,
    so I really didn't have to
  • 8:16 - 8:18
    simplify it much there.
  • 8:18 - 8:23
    Now by the R-S system, or by the
    Cahn-Ingold-Prelog system,
  • 8:23 - 8:28
    we want our number four group
    to be the one furthest back.
  • 8:28 - 8:31
    So we really want it where the
    number three position is.
  • 8:31 - 8:34
    And so the easiest way I can
    think of doing that is you can
  • 8:34 - 8:38
    imagine this is a tripod that's
    leaning upside down.
  • 8:38 - 8:39
    Or another way to view it
    is you can view it as an
  • 8:39 - 8:42
    umbrella, where this is the
    handle of the umbrella and
  • 8:42 - 8:45
    that's the top of the
    umbrella that would
  • 8:45 - 8:46
    block the rain, I guess.
  • 8:46 - 8:50
    But the easiest way to get the
    number four group that's
  • 8:50 - 8:53
    actually a hydrogen in the
    number three position would be
  • 8:53 - 8:55
    to rotate it.
  • 8:55 - 8:58
    You could imagine, rotate it
    around the axis defined by the
  • 8:58 - 8:58
    number one group.
  • 8:58 - 9:00
    So the number one group
    is just going to
  • 9:00 - 9:01
    stay where it is.
  • 9:01 - 9:02
    The number four is going
    to rotate to the
  • 9:02 - 9:04
    number three group.
  • 9:04 - 9:07
    Number three is going to rotate
    around to the number
  • 9:07 - 9:11
    two group, and then the number
    two group is going to rotate
  • 9:11 - 9:13
    to where the number four
    group is right now.
  • 9:13 - 9:15
    So if we were to redraw
    that, let's
  • 9:15 - 9:18
    redraw our chiral carbon.
  • 9:18 - 9:21
    So let me scroll over
    a little bit.
  • 9:21 - 9:23
    So we have our chiral carbon.
  • 9:23 - 9:25
    I put the little asterisk there
    to say that that's our
  • 9:25 - 9:27
    chiral carbon.
  • 9:27 - 9:28
    The number four group
    is now behind.
  • 9:28 - 9:30
    I'll do it with the circles.
  • 9:30 - 9:32
    It makes it look a little bit
    more like atoms. So the number
  • 9:32 - 9:36
    four group is now behind where
    the number three group used to
  • 9:36 - 9:38
    be, so number four
    is now there.
  • 9:41 - 9:43
    Number one hasn't changed.
  • 9:43 - 9:46
    That's kind of the axis that
    we rotated around.
  • 9:46 - 9:49
    So the number one group
    has not changed.
  • 9:49 - 9:51
    Number one is still there.
  • 9:51 - 9:55
    Number two is now where number
    four used to be, so number two
  • 9:55 - 9:57
    is now jutting out
    of the page.
  • 10:05 - 10:10
    And then we have number three
    is now where number two was.
  • 10:10 - 10:11
    So number three is there.
  • 10:14 - 10:17
    And now that we've put our
    fourth group behind the
  • 10:17 - 10:20
    molecule, we literally just
    figure out whether we have to
  • 10:20 - 10:22
    go clockwise or counterclockwise
    to go from
  • 10:22 - 10:23
    one, two to three.
  • 10:23 - 10:24
    And that's pretty
    straightforward.
  • 10:24 - 10:28
    To go from one to two to
    three, we have to go
  • 10:28 - 10:29
    counterclockwise.
  • 10:36 - 10:39
    Or another way to think of it,
    we're going to the left,
  • 10:39 - 10:40
    counterclockwise.
  • 10:40 - 10:42
    At least on the top of
    the clock, we're
  • 10:42 - 10:43
    going to the left.
  • 10:43 - 10:46
    And so, since we're going to
    left, this is S or sinister.
  • 10:46 - 10:51
    This is S, which stands
    for sinister, which
  • 10:51 - 10:53
    is Latin for left.
  • 10:53 - 10:53
    So we're done.
  • 10:53 - 10:57
    We've named it using
    the R-S system.
  • 10:57 - 11:02
    This molecule is (S)--
    sinister--
  • 11:02 - 11:03
    1-bromo-3-fluoro-2,3-di--
Title:
R,S (Cahn-Ingold-Prelog) Naming System Example 2
Description:

more » « less
Video Language:
English
Duration:
11:08

English subtitles

Incomplete

Revisions